Protein ZmMADS22
ZmMADS22 is a protein in the MADS family.
Information
TF Name: ZmMADS22
Species: Maize
TF Family: MADS
Gene Name(Synonym): MADS22
Uniprot ID: A0A1D6PDQ1
Subgenome: 1

Protein ZmMADS22

ZmMADS22 is a protein in the MADS family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF00319
Zm00001eb041650_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d032218DAPseq no logo sequence fimo position
Zm00001d032218DAPseq no logo sequence fimo position
Zm00001d032218ChIPseq no logo sequence fimo position
Zm00001d032218PChIPseq no logo sequence fimo position

Interactions where ZmMADS22 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmMADS22 is the target  
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There are 26 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb041650_T001 from maize genome v5

Amino Acid Sequence
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MGRGKIEIKRIDNATSRQVTFSKRRGGLFKKAKELAILCDAEVGLVVFSSTGRLYHFASTSMESVIERYEEREGHHQTMS
ASAEAKLMCREVLARLGRDGVARHGRVRRGRARHDGRRGAQGLRRMEARSGEEGEGKGRRGKRKGRQRPSKPLMADPSMG
ARVGERKWEGSIVSGSEEMRGCGPGSGTAGVRGGSVGVARGCVRTVCWCKDAATGGRRRA

MGRGKIEIKRIDNATSRQVTFSKRRGGLFKKAKELAILCDAEVGLVVFSSTGRLYHFASTSMESVIERYEEREGHHQTMS
ASAEAKLMCREVLARLGRDGVARHGRVRRGRARHDGRRGAQGLRRMEARSGEEGEGKGRRGKRKGRQRPSKPLMADPSMG
ARVGERKWEGSIVSGSEEMRGCGPGSGTAGVRGGSVGVARGCVRTVCWCKDAATGGRRRA

MGRGKIEIKRIDNATSRQVTFSKRRGGLFKKAKELAILCDAEVGLVVFSSTGRLYHFASTSMESVIERYEEREGHHQTMS
ASAEAKLMCREVLARLGRDGVARHGRVRRGRARHDGRRGAQGLRRMEARSGEEGEGKGRRGKRKGRQRPSKPLMADPSMG
ARVGERKWEGSIVSGSEEMRGCGPGSGTAGVRGGSVGVARGCVRTVCWCKDAATGGRRRA

MGRGKIEIKRIDNATSRQVTFSKRRGGLFKKAKELAILCDAEVGLVVFSSTGRLYHFASTSMESVIERYEEREGHHQTMS
ASAEAKLMCREVLARLGRDGVARHGRVRRGRARHDGRRGAQGLRRMEARSGEEGEGKGRRGKRKGRQRPSKPLMADPSMG
ARVGERKWEGSIVSGSEEMRGCGPGSGTAGVRGGSVGVARGCVRTVCWCKDAATGGRRRA

MGRGKIEIKRIDNATSRQVTFSKRRGGLFKKAKELAILCDAEVGLVVFSSTGRLYHFASTSMESVIERYEEREGHHQTMS
ASAEAKLMCREVLARLGRDGVARHGRVRRGRARHDGRRGAQGLRRMEARSGEEGEGKGRRGKRKGRQRPSKPLMADPSMG
ARVGERKWEGSIVSGSEEMRGCGPGSGTAGVRGGSVGVARGCVRTVCWCKDAATGGRRRA

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00319
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Nucleotide Sequence
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ATGGGGAGAGGGAAGATAGAGATCA...

GRMZM2G052045_T01 from maize genome v3


Related TFome: pUT4735

Amino Acid Sequence
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MGRGKIEIKRIDNATSRQVTFSKRRGGLFKKAKELAILCDAEVGLVVFSSTGRLYHFASTRFDSCSSFASLIDE

Nucleotide Sequence
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AGAAGGACAGCTACATTAAGGAATC...

Zm00001d032218_T001 from maize genome v4

Amino Acid Sequence
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MGRGKIEIKRIDNATSRQVTFSKRRGGLFKKAKELAILCDAEVGLVVFSSTGRLYHFASTRFDSCSSFASLIDE

Nucleotide Sequence
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AGAAGGACAGCTACATTAAGGAATC...


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